BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B08SP1|AL425986
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1476 0.0
>3x_Contig1675
Length = 13954
Score = 1476 bits (742), Expect = 0.0
Identities = 795/807 (98%), Gaps = 7/807 (0%)
Strand = Plus / Plus
Query: 1 tatctyaaatcacacttgccgattgcaaggagttatgtcctgatagcattagtgccgtga 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7604 tatctgaaatcacacttgccgattgcaaggagttatgtcctgatagcattagtgccgtga 7663
Query: 61 gs-ttaagacatgcataaacaaatttgtatagacacggaagaacaagcaccggaacaaga 119
| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 7664 ggcttaagacatgcataaacaaatttgtt--gacacggaagaacaagcaccggaacaaga 7721
Query: 120 attagtgttgactatgaaaggcttacaccagacgttaaatgaaaagttacaagaattcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7722 attagtgttgactatgaaaggcttacaccagacgttaaatgaaaagttacaagaattcca 7781
Query: 180 atctaattatgcgcaactcagattggatttgttggaaatcgtgaagaggaacagtggatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7782 atctaattatgcgcaactcagattggatttgttggaaatcgtgaagaggaacagtggatc 7841
Query: 240 tggttcaggttcctctcagtcttctcaacaacttcaacatcaaccttcttcgcaagatta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7842 tggttcaggttcctctcagtcttctcaacaacttcaacatcaaccttcttcgcaagatta 7901
Query: 300 cwtcgatagagctccacaccattcttcacacacgccatcatcacccaaatacagatcgaa 359
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7902 cttcgatagagctccacaccattcttcacacacgccatcatcacccaaatacagatcgaa 7961
Query: 360 ttccaatccagggctgccaccacaatcttcaagcaccagaaatgtttcatcgtcacatat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7962 ttccaatccagggctgccaccacaatcttcaagcaccagaaatgtttcatcgtcacatat 8021
Query: 420 tgccaccacacccggatcggcgaatactccaggcggagctggagtatcatcagctccaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8022 tgccaccacacccggatcggcgaatactccaggcggagctggagtatcatcagctccaag 8081
Query: 480 ttcagaacctatgaaacaattacgtgcctcaaargaggattcatgtgaaaaggttttaag 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8082 ttcagaacctatgaaacaattacgtgcctcaaaggaggattcatgtgaaaaggttttaag 8141
Query: 540 aaatgcgatgaagaggcacaatttgaatagaaacggattaggagacagcatgttttagtg 599
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 8142 aaatgcgatgaagaggcacaatttgaat-gaaacggatt-ggagacagcatgttttagtg 8199
Query: 600 atatgctatgagagatcaagaacagagttcttgatctcgatgaaaaaccagtacagatct 659
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8200 atatgctatg-gagatcaagaac-gagttcttgatctcgatgaaaaaccagtacagatct 8257
Query: 660 tcaagtctttaaaacaacaaggcctgcatcctgcaattatgttaagacaaaaaggtgact 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8258 tcaagtctttaaaacaacaaggcctgcatcctgcaattatgttaagacaaaaaggtgact 8317
Query: 720 ttgaggaagtgggagaaatggcagcaacaccgggaggtaggctataatgtttgttatctc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8318 ttgaggaagtgggagaaatggcagcaacaccgggaggtaggctataatgtttgttatctc 8377
Query: 780 ctccttcatcaactggaaaaaacactt 806
|||||||||||||||||||||||||||
Sbjct: 8378 ctccttcatcaactggaaaaaacactt 8404
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5550
Number of Sequences: 1807
Number of extensions: 5550
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)